Associations of genotypes and haplotypes of IL-17 with risk of gastric cancer in an eastern Chinese population

Oncotarget. 2016 Dec 13;7(50):82384-82395. doi: 10.18632/oncotarget.11616.

Abstract

Interleukin-17 plays a crucial role in inflammation-related carcinogenesis. We hypothesize that genetic variants in IL-17 are associated with gastric cancer (GCa) risk, and we genotyped five potentially functional single nucleotide polymorphisms (SNPs) (rs1974226 G > A, rs2275913 A > G, rs3819024 A > G, rs4711998 A > G, and rs8193036 C > T) of IL-17 in 1121 GCa patients and 1216 cancer-free controls in an eastern Chinese population. Logistic regression analysis was used to calculate odds ratios (OR) and 95% confidence intervals (CI). Meta-analysis and genotype-mRNA expression correlation were performed to further validate positive associations. We found that an increased GCa risk was independently associated with rs1974226 (adjusted OR = 2.60, 95% CI = 1.27-5.32 for AA vs. GG + GA) and rs2275913 (adjusted OR = 1.33, 95% CI = 1.03-1.72 for GA + AA vs. GG), while a decreased GCa risk was independently associated with rs3819024 (adjusted OR = 0.72, 95% CI = 0.54-0.96 for GG vs. AA + AG). Additional meta-analyses confirmed the observed risk association with rs2275913. We also found that two IL-17 haplotypes (G-G-G-A-C) and (A-G-G-A-C) (in the order of rs1974226, rs2275913, rs3819024, rs4711998 and rs8193036) were associated with a reduced GCa risk (adjusted OR = 0.64, 95% CI = 0.46-0.89 and adjusted OR = 0.38, 95% CI = 0.17-0.81, respectively). However, the expression Quantitative Trait Locus (eQTL) analysis for the genotype-phenotype correlation did not find mRNA expression changes associated with either the genotypes. In conclusions, genetic variants of IL-17 are likely to be associated with risk of GCa, and additional larger studies with functional validation are needed to explore the molecular mechanisms underlying the observed associations.

Keywords: gastric cancer; genetic variants; interleukin-17; molecular epidemiology; susceptibility.

Publication types

  • Comparative Study
  • Meta-Analysis

MeSH terms

  • Asian People / genetics
  • Case-Control Studies
  • Cell Line, Tumor
  • Chi-Square Distribution
  • China
  • Female
  • Gene Frequency
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Haplotypes*
  • Heterozygote
  • Homozygote
  • Humans
  • Interleukin-17 / genetics*
  • Linear Models
  • Logistic Models
  • Male
  • Middle Aged
  • Odds Ratio
  • Phenotype
  • Polymorphism, Single Nucleotide*
  • Quantitative Trait Loci
  • RNA, Messenger / genetics
  • Risk Assessment
  • Risk Factors
  • Stomach Neoplasms / ethnology
  • Stomach Neoplasms / genetics*
  • Stomach Neoplasms / immunology

Substances

  • IL17A protein, human
  • Interleukin-17
  • RNA, Messenger