Corynebacterium diphtheriae HmuT: dissecting the roles of conserved residues in heme pocket stabilization

J Biol Inorg Chem. 2016 Oct;21(7):875-86. doi: 10.1007/s00775-016-1386-3. Epub 2016 Aug 25.

Abstract

The heme-binding protein HmuT is part of the Corynebacterium diphtheriae heme uptake pathway and is responsible for the delivery of heme to the HmuUV ABC transporter. HmuT binds heme with a conserved His/Tyr heme axial ligation motif. Sequence alignment revealed additional conserved residues of potential importance for heme binding: R237, Y272 and M292. In this study, site-directed mutations at these three positions provided insight into the nature of axial heme binding to the protein and its effect on the thermal stability of the heme-loaded protein fold. UV-visible absorbance, resonance Raman (rR) and thermal unfolding experiments, along with collision-induced dissociation electrospray ionization mass spectrometry, were used to probe the contributions of each mutated residue to the stability of ϖ HmuT. Thermal unfolding and rR experiments revealed that R237 and M292 are important residues for heme binding. Arginine 237 is a hydrogen-bond donor to the phenol side chain of Y235, which serves as an axial heme ligand. Methionine 292 serves a supporting structural role, favoring the R237 hydrogen-bond donation, which elicits a, heretofore, unobserved modulating influence on π donation by the axial tyrosine ligand in the heme carbonyl complex, HmuT-CO.

Keywords: Electrospray; Heme binding; Heme uptake; Resonance Raman; Thermal unfolding.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Conserved Sequence*
  • Heme*
  • Hydrogen Bonding
  • Lipoproteins / chemistry*
  • Lipoproteins / genetics
  • Lipoproteins / metabolism
  • Models, Molecular
  • Mutagenesis, Site-Directed
  • Mutation
  • Protein Stability
  • Protein Structure, Secondary
  • Protein Unfolding
  • Sequence Alignment
  • Temperature

Substances

  • Bacterial Proteins
  • HmuT protein, Corynebacterium diphtheriae
  • Lipoproteins
  • Heme