Rhizobium favelukesii sp. nov., isolated from the root nodules of alfalfa (Medicago sativa L)

Int J Syst Evol Microbiol. 2016 Nov;66(11):4451-4457. doi: 10.1099/ijsem.0.001373. Epub 2016 Aug 3.

Abstract

Strains LPU83T and Or191 of the genus Rhizobium were isolated from the root nodules of alfalfa, grown in acid soils from Argentina and the USA. These two strains, which shared the same plasmid pattern, lipopolysaccharide profile, insertion-sequence fingerprint, 16S rRNA gene sequence and PCR-fingerprinting pattern, were different from reference strains representing species of the genus Rhizobium with validly published names. On the basis of previously reported data and from new DNA-DNA hybridization results, phenotypic characterization and phylogenetic analyses, strains LPU83T and Or191 can be considered to be representatives of a novel species of the genus Rhizobium, for which the name Rhizobium favelukesii sp. nov. is proposed. The type strain of this species is LPU83T (=CECT 9014T=LMG 29160T), for which an improved draft-genome sequence is available.

MeSH terms

  • Argentina
  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • Medicago sativa / microbiology*
  • Nucleic Acid Hybridization
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Rhizobium / classification*
  • Rhizobium / genetics
  • Rhizobium / isolation & purification
  • Root Nodules, Plant / microbiology*
  • Sequence Analysis, DNA
  • United States

Substances

  • DNA, Bacterial
  • RNA, Ribosomal, 16S