Ensembles of Deep Learning Architectures for the Early Diagnosis of the Alzheimer's Disease

Int J Neural Syst. 2016 Nov;26(7):1650025. doi: 10.1142/S0129065716500258. Epub 2016 Apr 4.

Abstract

Computer Aided Diagnosis (CAD) constitutes an important tool for the early diagnosis of Alzheimer's Disease (AD), which, in turn, allows the application of treatments that can be simpler and more likely to be effective. This paper explores the construction of classification methods based on deep learning architectures applied on brain regions defined by the Automated Anatomical Labeling (AAL). Gray Matter (GM) images from each brain area have been split into 3D patches according to the regions defined by the AAL atlas and these patches are used to train different deep belief networks. An ensemble of deep belief networks is then composed where the final prediction is determined by a voting scheme. Two deep learning based structures and four different voting schemes are implemented and compared, giving as a result a potent classification architecture where discriminative features are computed in an unsupervised fashion. The resulting method has been evaluated using a large dataset from the Alzheimer's disease Neuroimaging Initiative (ADNI). Classification results assessed by cross-validation prove that the proposed method is not only valid for differentiate between controls (NC) and AD images, but it also provides good performances when tested for the more challenging case of classifying Mild Cognitive Impairment (MCI) Subjects. In particular, the classification architecture provides accuracy values up to 0.90 and AUC of 0.95 for NC/AD classification, 0.84 and AUC of 0.91 for stable MCI/AD classification and 0.83 and AUC of 0.95 for NC/MCI converters classification.

Keywords: Alzheimer’s disease classification; Deep learning; ensemble.

Publication types

  • Comparative Study

MeSH terms

  • Aged
  • Alzheimer Disease / classification
  • Alzheimer Disease / diagnostic imaging*
  • Area Under Curve
  • Brain / diagnostic imaging*
  • Cognitive Dysfunction / classification
  • Cognitive Dysfunction / diagnostic imaging
  • Datasets as Topic
  • Disease Progression
  • Early Diagnosis
  • Female
  • Gray Matter / diagnostic imaging
  • Humans
  • Image Interpretation, Computer-Assisted / methods*
  • Imaging, Three-Dimensional / methods*
  • Male
  • Pattern Recognition, Automated / methods
  • Positron-Emission Tomography / methods*
  • ROC Curve
  • Unsupervised Machine Learning*