Sequences of stilboflavin C: towards the peptaibiome of the filamentous fungus Stilbella (= Trichoderma) flavipes

J Pept Sci. 2016 Aug;22(8):517-24. doi: 10.1002/psc.2897.

Abstract

Filamentous fungi of the genus Stilbella are recognized as an abundant source of naturally occurring α-aminoisobutyric acid-containing peptides. The culture broth of Stilbella (Trichoderma) flavipes CBS 146.81 yielded a mixture of peptides named stilboflavins (SF), and these were isolated and separated by preparative TLC into groups named SF-A, SF-B, and SF-C. Although all three of these groups resolved as single spots on thin-layer chromatograms, HPLC analysis revealed that each of the groups represents very microheterogeneous mixtures of closely related peptides. Here, we report on the sequence analysis of SF-C peptides, formerly isolated by preparative TLC. HPLC coupled to QqTOF-ESI-HRMS provided the sequences of 10 16-residue peptides and five 19-residue peptides, all of which were N-terminally acetylated. In contrast to the previously described SF-A and SF-B peptaibols, SF-C peptaibols contain Ser-Alaol or Ser-Leuol, which are rarely found as C-termini, and repetitive Leu-Aib-Gly sequences, which have not been detected in peptaibols before. Taking the previously determined sequences of SF-A and SF-B into account, the entirety of peptides produced by S. flavipes (the 'peptaibiome') approaches or exceeds 100 non-ribosomally biosynthesized peptaibiotics. Copyright © 2016 European Peptide Society and John Wiley & Sons, Ltd.

Keywords: Chirasil-l-Val; electrospray mass spectrometry; gas chromatography-selected ion mass spectrometry, Stilbella, Trichoderma; non-ribosomal peptide synthesis; peptaibiotics; peptaibols; α-aminoisobutyric acid (Aib), polypeptide antibiotics.

MeSH terms

  • Acetylation
  • Amino Acid Sequence
  • Aminoisobutyric Acids / isolation & purification
  • Chromatography, High Pressure Liquid
  • Chromatography, Thin Layer
  • Culture Media / chemistry
  • Fungal Proteins / chemistry*
  • Fungal Proteins / classification
  • Fungal Proteins / isolation & purification
  • Peptaibols / chemistry*
  • Peptaibols / classification
  • Peptaibols / isolation & purification
  • Protein Structure, Secondary
  • Proteome / chemistry*
  • Proteome / classification
  • Proteome / isolation & purification
  • Sequence Analysis, Protein
  • Trichoderma / chemistry*
  • Trichoderma / physiology

Substances

  • Aminoisobutyric Acids
  • Culture Media
  • Fungal Proteins
  • Peptaibols
  • Proteome
  • 2-aminoisobutyric acid