Insights into the molecular phylogeny and historical biogeography of the white-clawed crayfish (Decapoda, Astacidae)

Mol Phylogenet Evol. 2016 Oct:103:26-40. doi: 10.1016/j.ympev.2016.07.009. Epub 2016 Jul 9.

Abstract

In this study, the evolutionary history of the white-clawed crayfish (WCC) was evaluated using large-scale datasets comprising >1350 specimens from the entire distribution range. Using species delimitation methods on mitochondrial DNA (mtDNA) sequences, we propose four primary species hypotheses for WCC. Sequences for several nuclear regions were screened but none showed significant variation within WCC. This result favours a single secondary species hypothesis and indicates the existence of a mito-nuclear discordance in WCC. Therefore, mtDNA groups were considered only as genetic units that carry information about ancient divergences within WCC and not as taxonomic units. The reconstruction of ancestral ranges and divergence time estimates were used to link the current genetic structure with paleogeographic processes. These results showed that the emergence of mtDNA groups in WCC could be related to the Messinian Salinity Crisis, the climate cooling during the Pliocene and Pleistocene, and (paleo)shifting of the Adriatic Sea coastline in the Padanovenezian Plain. The most recent common ancestor of the mtDNA groups most likely originated from Dalmatia (eastern Adriatic coast) as indicated by the reconstruction of ancestral ranges. This ecoregion, along with the Gulf of Venice Drainages, harbours a high genetic diversity and should be emphasised as an area of the highest conservation priority.

Keywords: Austropotamobius pallipes species complex; Conservation; Reconstruction of ancestral ranges; Species delimitation; Trans-Adriatic paleodispersals.

MeSH terms

  • Animals
  • Astacoidea / classification*
  • Astacoidea / genetics
  • DNA / chemistry
  • DNA / isolation & purification
  • DNA / metabolism
  • DNA, Mitochondrial / classification
  • DNA, Mitochondrial / genetics
  • Genetic Variation
  • Phylogeny
  • Phylogeography
  • RNA, Ribosomal, 16S / classification
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA

Substances

  • DNA, Mitochondrial
  • RNA, Ribosomal, 16S
  • DNA