Modulating the Structure and Function of an Aminoacyl-tRNA Synthetase Cofactor by Biotinylation

J Biol Chem. 2016 Aug 12;291(33):17102-11. doi: 10.1074/jbc.M116.734343. Epub 2016 Jun 21.

Abstract

Arc1p is a yeast-specific tRNA-binding protein that forms a ternary complex with glutamyl-tRNA synthetase (GluRSc) and methionyl-tRNA synthetase (MetRS) in the cytoplasm to regulate their catalytic activities and subcellular distributions. Despite Arc1p not being involved in any known biotin-dependent reaction, it is a natural target of biotin modification. Results presented herein show that biotin modification had no obvious effect on the growth-supporting activity, subcellular distribution, tRNA binding, or interactions of Arc1p with GluRSc and MetRS. Nevertheless, biotinylation of Arc1p was temperature dependent; raising the growth temperature from 30 to 37 °C drastically reduced its biotinylation level. As a result, Arc1p purified from a yeast culture that had been grown overnight at 37 °C was essentially biotin free. Non-biotinylated Arc1p was more heat stable, more flexible in structure, and more effective than its biotinylated counterpart in promoting glutamylation activity of the otherwise inactive GluRSc at 37 °C in vitro Our study suggests that the structure and function of Arc1p can be modulated via biotinylation in response to temperature changes.

Keywords: aminoacyl tRNA synthetase; biotin; post-translational modification (PTM); protein synthesis; transfer RNA (tRNA).

MeSH terms

  • Biotinylation*
  • Glutamate-tRNA Ligase / chemistry*
  • Glutamate-tRNA Ligase / genetics
  • Glutamate-tRNA Ligase / metabolism
  • Hot Temperature*
  • Methionine-tRNA Ligase / chemistry*
  • Methionine-tRNA Ligase / genetics
  • Methionine-tRNA Ligase / metabolism
  • Protein Stability
  • RNA-Binding Proteins / chemistry*
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism
  • Saccharomyces cerevisiae / chemistry*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae Proteins / chemistry*
  • Saccharomyces cerevisiae Proteins / genetics
  • Saccharomyces cerevisiae Proteins / metabolism

Substances

  • ARC1 protein, S cerevisiae
  • RNA-Binding Proteins
  • Saccharomyces cerevisiae Proteins
  • Methionine-tRNA Ligase
  • Glutamate-tRNA Ligase