shRNA-Induced Gene Knockdown In Vivo to Investigate Neutrophil Function

Methods Mol Biol. 2016:1407:169-77. doi: 10.1007/978-1-4939-3480-5_13.

Abstract

To silence genes in neutrophils efficiently, we exploited the RNA interference and developed an shRNA-based gene knockdown technique. This method involves transfection of mouse bone marrow-derived hematopoietic stem cells with retroviral vector carrying shRNA directed at a specific gene. Transfected stem cells are then transplanted into irradiated wild-type mice. After engraftment of stem cells, the transplanted mice have two sets of circulating neutrophils. One set has a gene of interest knocked down while the other set has full complement of expressed genes. This efficient technique provides a unique way to directly compare the response of neutrophils with a knocked-down gene to that of neutrophils with the full complement of expressed genes in the same environment.

Keywords: Gene knockdown; Neutrophils; RNA interference; Retroviral vectors; Short hairpin RNA; Transplantation.

MeSH terms

  • Animals
  • Bone Marrow Cells / metabolism
  • Bone Marrow Transplantation
  • Cell Line
  • Gene Knockdown Techniques
  • Gene Silencing*
  • Genetic Vectors / genetics
  • Mice
  • Neutrophils / physiology*
  • RNA Interference*
  • RNA, Small Interfering / genetics*
  • Retroviridae / genetics
  • Transduction, Genetic

Substances

  • RNA, Small Interfering