A Transcriptomic Biomarker to Quantify Systemic Inflammation in Sepsis - A Prospective Multicenter Phase II Diagnostic Study

EBioMedicine. 2016 Apr:6:114-125. doi: 10.1016/j.ebiom.2016.03.006. Epub 2016 Mar 8.

Abstract

Development of a dysregulated immune response discriminates sepsis from uncomplicated infection. Currently used biomarkers fail to describe simultaneously occurring pro- and anti-inflammatory responses potentially amenable to therapy. Marker candidates were screened by microarray and, after transfer to a platform allowing point-of-care testing, validated in a confirmation set of 246 medical and surgical patients. We identified up-regulated pathways reflecting innate effector mechanisms, while down-regulated pathways related to adaptive lymphocyte functions. A panel of markers composed of three up- (Toll-like receptor 5; Protectin; Clusterin) and 4 down-regulated transcripts (Fibrinogen-like 2; Interleukin-7 receptor; Major histocompatibility complex class II, DP alpha1; Carboxypeptidase, vitellogenic-like) described the magnitude of immune alterations. The created gene expression score was significantly greater in patients with definite as well as with possible/probable infection than with no infection (median (Q25/Q75): 80 (60/101)) and 81 (58/97 vs. 49 (27/66), AUC-ROC=0.812 (95%-CI 0.755-0.869), p<0.0001). Down-regulated lymphocyte markers were associated with prognosis with good sensitivity but limited specificity. Quantifying systemic inflammation by assessment of both pro- and anti-inflammatory innate and adaptive immune responses provides a novel option to identify patients-at-risk and may facilitate immune interventions in sepsis.

Keywords: Adaptive immunity; Clinical utility; Host response; Point-of-care; RT-qPCR; Transcriptomic profiling.

Publication types

  • Multicenter Study

MeSH terms

  • Adaptive Immunity
  • Gene Expression Profiling / methods*
  • Gene Expression Regulation
  • Genetic Markers / immunology*
  • Humans
  • Immunity, Innate
  • Oligonucleotide Array Sequence Analysis / methods*
  • Point-of-Care Systems
  • Prognosis
  • Prospective Studies
  • Sensitivity and Specificity
  • Sepsis / diagnosis*
  • Sepsis / genetics
  • Sepsis / immunology

Substances

  • Genetic Markers