Force Spectroscopy in Studying Infection

Adv Exp Med Biol. 2016:915:307-27. doi: 10.1007/978-3-319-32189-9_19.

Abstract

Biophysical force spectroscopy tools-for example, optical tweezers, magnetic tweezers, atomic force microscopy-have been used to study elastic, mechanical, conformational and dynamic properties of single biological specimens from single proteins to whole cells to reveal information not accessible by ensemble average methods such as X-ray crystallography, mass spectroscopy, gel electrophoresis and so on. Here, we review the application of these tools on a range of infection-related questions from antibody-inhibited protein processivity to virus-cell adhesion. In each case, we focus on how the instrumental design tailored to the biological system in question translates into the functionality suitable for that particular study. The unique insights that force spectroscopy has gained to complement knowledge learned through population averaging techniques in interrogating biomolecular details prove to be instrumental in therapeutic innovations such as those in structure-based drug design.

Keywords: Atomic force microscopy; Magnetic tweezers; Optical tweezers.

Publication types

  • Review

MeSH terms

  • Animals
  • Bacteria* / genetics
  • Bacteria* / immunology
  • Bacteria* / metabolism
  • Bacterial Infections / immunology
  • Bacterial Infections / microbiology*
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism
  • Biomechanical Phenomena
  • DNA Replication
  • DNA, Bacterial / biosynthesis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Viral / biosynthesis
  • DNA, Viral / chemistry
  • DNA, Viral / genetics
  • Gene Expression Regulation, Bacterial
  • Gene Expression Regulation, Viral
  • Host-Pathogen Interactions
  • Humans
  • Magnetics*
  • Microscopy, Atomic Force*
  • Optical Tweezers*
  • Protein Binding
  • Virus Attachment
  • Virus Diseases / immunology
  • Virus Diseases / virology*
  • Viruses* / genetics
  • Viruses* / immunology
  • Viruses* / metabolism

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • DNA, Viral