Multivalent ligand mimetics of LecA from P. aeruginosa: synthesis and NMR studies

Carbohydr Res. 2016 Jun 24:429:23-8. doi: 10.1016/j.carres.2016.04.023. Epub 2016 Apr 28.

Abstract

Molecular recognition of glycans plays an important role in glycomic and glycobiology studies. For example, pathogens have a number of different types of lectin for targeting host sugars. In bacteria, lectins exist sometimes as domains of bacterial toxins and exploit adhesion to glycoconjugates as a means of entering host cells. Herein, we describe the synthesis of three glycodendrons with the aim to dissect the fine structural details involved in the multivalent carbohydrate-protein interactions. LecA, from the pathogen Pseudomonas aeruginosa, has been used to characterize galactose dendrons interaction using one of the most widespread NMR technique for the elucidation of receptor-ligand binding in solution, the saturation transfer difference (STD) NMR. Furthermore, the effective hydrodynamic radius of each dendrimer recognized by LecA was estimated from the diffusion coefficients determined by pulsed-field-gradient stimulated echo (PFG-STE) NMR experiments.

Keywords: Dendrons; Lectins; Ligand mimetics; P. aeruginosa; PFG-STE NMR experiments; STD NMR.

MeSH terms

  • Adhesins, Bacterial / chemistry*
  • Binding Sites
  • Carbohydrate Sequence
  • Dendrimers / chemical synthesis
  • Dendrimers / chemistry*
  • Diffusion
  • Galactose / chemistry*
  • Glycoconjugates / chemistry*
  • Lectins / chemistry
  • Ligands
  • Magnetic Resonance Spectroscopy / methods
  • Molecular Mimicry
  • Protein Binding
  • Pseudomonas aeruginosa / chemistry*
  • Pseudomonas aeruginosa / metabolism

Substances

  • Adhesins, Bacterial
  • Dendrimers
  • Glycoconjugates
  • LecA protein, bacteria
  • Lectins
  • Ligands
  • Galactose