MicroRNA-338 Attenuates Cortical Neuronal Outgrowth by Modulating the Expression of Axon Guidance Genes

Mol Neurobiol. 2017 Jul;54(5):3439-3452. doi: 10.1007/s12035-016-9925-z. Epub 2016 May 14.

Abstract

MicroRNAs (miRs) are small non-coding RNAs that confer robustness to gene networks through post-transcriptional gene regulation. Previously, we identified miR-338 as a modulator of axonal outgrowth in sympathetic neurons. In the current study, we examined the role of miR-338 in the development of cortical neurons and uncovered its downstream mRNA targets. Long-term inhibition of miR-338 during neuronal differentiation resulted in reduced dendritic complexity and altered dendritic spine morphology. Furthermore, monitoring axon outgrowth in cortical cells revealed that miR-338 overexpression decreased, whereas inhibition of miR-338 increased axonal length. To identify gene targets mediating the observed phenotype, we inhibited miR-338 in cortical neurons and performed whole-transcriptome analysis. Pathway analysis revealed that miR-338 modulates a subset of transcripts involved in the axonal guidance machinery by means of direct and indirect gene targeting. Collectively, our results implicate miR-338 as a novel regulator of cortical neuronal maturation by fine-tuning the expression of gene networks governing cortical outgrowth.

Keywords: Cortex; MicroRNA; Neurite development; Neurodevelopment; Robo2.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Axon Guidance / genetics*
  • Base Sequence
  • Cerebral Cortex / cytology*
  • Dendritic Spines / metabolism
  • Gene Expression Profiling
  • Gene Expression Regulation*
  • HEK293 Cells
  • Humans
  • MicroRNAs / genetics
  • MicroRNAs / metabolism*
  • Neurons / cytology*
  • Neurons / metabolism*
  • Rats, Wistar
  • Receptors, Immunologic / genetics
  • Receptors, Immunologic / metabolism

Substances

  • MIRN338 microRNA, rat
  • MicroRNAs
  • Receptors, Immunologic
  • Robo2 protein, rat