Ancherythroculter lini is the endemic species of fish in China. In this study, we determined the complete mitochondrial genome of Ancherythroculter lini using the next-generation sequencing (NGS). The total length of the complete mitochondrial genome is 16 616 bp which consists of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNAs genes, and a control region. Most of the genes are encoded on the heavy strand except ND6 and eight tRNA genes. The genes order and locations are similar to other vertebrates. The H-strand has a nucleotide composition of 30.78% A, 24.74% T, 16.48% G, and 28.00% C. 13 intergenic spacers and five gene overlaps exist in the complete mitochondrial genome. And, we found the culter genus and Ancherythroculter nigrocauda are more closely related to Ancherythroculter lini by constructing a phylogenetic tree.
Keywords: Ancherythroculter lini; mitochondrial genome; phylogenetic tree.