The recurrent laryngeal nerve (RLN) shows some anatomical variations that can potentially compromise the safety of thyroid surgery. The purpose of this prospective study was to identify the anatomical variations of the RLN in Chinese patients undergoing thyroid surgery. Between January 2007 and December 2013, 2,404 Chinese patients were hospitalized for thyroid surgery with dissecting of the RLN unilaterally or bilaterally. The patients consisted of 510 men and 1,894 women, with a median age of 45.0 years. Overall 3,275 RLNs, including 1,576 left- and 1,699 right-side nerves, were dissected. The anatomical variations were identified in 690 RLNs, including 305 left- and 385 right-side nerves. We identified as many as seven RLN anatomical variations in Chinese patients. These findings indicate that anatomical variations of the RLN are common, and the identification of these anatomical variations of the RLN can help to minimize the risk of post-operative RLN paralysis.