Antimicrobial resistance and class 1 integron-associated gene cassettes in Salmonella enterica serovar Typhimurium isolated from pigs at slaughter and abattoir environment

Vet Microbiol. 2016 Oct 15:194:84-92. doi: 10.1016/j.vetmic.2016.04.020. Epub 2016 Apr 25.

Abstract

Forty-five multi-resistant Salmonella enterica subsp. enterica serovar (S.) Typhimurium isolates obtained at five pig abattoirs in Southern Brazil were characterized. Their relatedness was determined by XbaI-macrorestriction analysis. Resistance genes, integrons and plasmid-mediated quinolone resistance genes (PMQR) were investigated by PCR. Amplicons for the variable part of class 1 integrons and the quinolone resistance-determining regions (QRDR) were sequenced. Plasmids were characterized by conjugation assays and replicon typing. Eighteen XbaI-macrorestriction patterns and 19 plasmid profiles were seen. Resistance to ampicillin (blaTEM), chloramphenicol (catA1 and floR), streptomycin (strA-strB), streptomycin/spectinomycin (aadA variants), sulphonamides (sul1, sul2, sul3) and tetracyclines [tet(A) and tet(B)] were commonly found. A trimethoprim resistance gene, dfrA8, was identified on a 100-kb plasmid. Single substitutions in the QRDR of GyrA but no PMQR genes were found. Twenty-five isolates carried class 1 integrons with an aadA23 gene cassette or unusual class 1 integrons with a dfrA12-orfF-aadA27 gene cassette array. Both integrons were found on large conjugative plasmids. Salmonella plasmid-located virulence genes spvR, spvA, spvB, rck and pefA were found on an IncFIB resistance plasmid. Hybrid virulence-resistance plasmids or plasmids harbouring class 1 integrons may play a role in the maintenance and dissemination of antimicrobial resistance among S. Typhimurium in this pig production system.

Keywords: Co-selection; Food-producing animals; Hybrid virulence-resistance plasmids; Unusual class 1 integron.

MeSH terms

  • Abattoirs*
  • Animals
  • Anti-Bacterial Agents / pharmacology
  • Brazil
  • Drug Resistance, Bacterial / genetics*
  • Genes, Bacterial / genetics*
  • Integrons / genetics*
  • Salmonella typhimurium / drug effects*
  • Salmonella typhimurium / genetics*
  • Salmonella typhimurium / pathogenicity
  • Swine
  • Virulence / genetics

Substances

  • Anti-Bacterial Agents