The present study was conducted to evaluate the influence of land use change on dissolved organic carbon (DOC) export in Naoli River watershed, Northeast China. Seasonal variation of DOC concentrations of the river water and its relationship with land use in the whole watershed and 100 m riparian zone at the annual average scale were analyzed using the method of field sampling, laboratory analysis, GIS and statistics analysis. The results showed that the concentrations of DOC under base flow conditions in spring and summer were significantly higher than that in fall in the study watershed. The seasonal trend of DOC concentrations in wetland-watersheds was similar to that in all the sub-watersheds, while significantly different from that in non-wetland watersheds. On the annual average scale, percentage of wetland in the whole watershed and paddy field in the 100 m riparian zone had positive relationship with the DOC concentration in the river water, while percentage of forest in the whole watershed had negative relationship with it (P < 0.05). It indicated that wetland in the sub-watershed played a significant role in the seasonal variation of DOC in river water of Naoli River watershed. Wetland in the watershed and paddy field in the 100 m riparian zone significantly promoted DOC export, while forest alleviated it. Land use change in the watershed in the past few decades dramatically changed the DOC balance of river water.