Status of hepatic DNA methylome predetermines and modulates the severity of non-alcoholic fatty liver injury in mice

BMC Genomics. 2016 Apr 22:17:298. doi: 10.1186/s12864-016-2617-2.

Abstract

Background: Nonalcoholic fatty liver disease (NAFLD) is a major health problem and a leading cause of chronic liver disease in the United States and Western countries. In humans, genetic factors greatly influence individual susceptibility to NAFLD; nonetheless, the effect of inter-individual differences in the normal liver epigenome with regard to the susceptibility to NAFLD has not been determined.

Results: In the present study, we investigated the association between the DNA methylation status in the livers of A/J and WSB/EiJ mice and the severity of NAFLD-associated liver injury. We demonstrate that A/J and WSB/EiJ mice, which are characterized by significant differences in the severity of liver injury induced by a choline- and folate-deficient (CFD) diet exhibit substantial differences in cytosine DNA methylation in their normal livers. Furthermore, feeding A/J and WSB/EiJ mice a CFD diet for 12 weeks resulted in different trends and changes in hepatic cytosine DNA methylation.

Conclusion: Our findings indicate a primary role of hepatic DNA methylation in the pathogenesis of NAFLD and suggest that individual variations in DNA methylation across the genome may be a factor determining and influencing the vulnerability to NAFLD.

Keywords: DNA methylation; Inter-strain differences; Mouse; Non-alcoholic fatty liver injury; Susceptibility.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Choline
  • CpG Islands
  • Cytosine / chemistry
  • DNA (Cytosine-5-)-Methyltransferase 1
  • DNA (Cytosine-5-)-Methyltransferases / metabolism
  • DNA Methylation*
  • DNA Methyltransferase 3A
  • Diet
  • Epigenesis, Genetic*
  • Folic Acid
  • Histones / metabolism
  • Liver / physiopathology*
  • Mice
  • Mice, Inbred A
  • Mice, Inbred Strains
  • Non-alcoholic Fatty Liver Disease / genetics*

Substances

  • DNMT3A protein, human
  • Histones
  • Cytosine
  • Folic Acid
  • DNA (Cytosine-5-)-Methyltransferase 1
  • DNA (Cytosine-5-)-Methyltransferases
  • DNA Methyltransferase 3A
  • Choline