TWO-DIMENSIONAL GEL ELECTROPHORESIS ANALYSIS OF BROWN ALGAL PROTEIN EXTRACTS(1)

J Phycol. 2008 Oct;44(5):1315-21. doi: 10.1111/j.1529-8817.2008.00575.x. Epub 2008 Sep 17.

Abstract

High-quality protein extracts are required for proteomic studies, a field that is poorly developed for marine macroalgae. A reliable phenol extraction protocol using Scytosiphon gracilis Kogame and Ectocarpus siliculosus (Dillwyn) Lyngb. (Phaeophyceae) as algal models resulted in high-quality protein extracts. The performance of the new protocol was tested against four methods available for vascular plants and a seaweed. The protocol, which includes an initial step to remove salts from the algal tissues, allowed the use of highly resolving two-dimensional gel electrophoresis (2-DE) protein analyses, providing the opportunity to unravel potentially novel physiological processes unique to this group of marine organisms.

Keywords: 2-DE; Phaeophyceae; algae; protein extraction methods; proteomics.

Associated data

  • GENBANK/AAF66150
  • GENBANK/AAL47754
  • GENBANK/AAL76325
  • GENBANK/AAL79536
  • GENBANK/AAM93951
  • GENBANK/AAN62452
  • GENBANK/AAS55634
  • GENBANK/AAU11484
  • GENBANK/ABB02445.1
  • GENBANK/CAC67484
  • GENBANK/CAI56206