Characterization and primary functional analysis of a bamboo NAC gene targeted by miR164b

Plant Cell Rep. 2016 Jun;35(6):1371-83. doi: 10.1007/s00299-016-1970-6. Epub 2016 Mar 28.

Abstract

PeSNAC1 , a stress-related NAC1 from Phyllostachys edulis , was characterized. Ectopic expression in Arabidopsis indicated that PeSNAC1 together with ped -miR164b participated in the regulation of organ boundaries and stress tolerance. NAC (NAM, ATAF1/2 and CUC2) participates in many different processes regulating plant growth, development, and stress response. A total of 125 NAC genes have been predicted in moso bamboo (Phyllostachys edulis), but their roles are poorly understood. PeSNAC1 targeted by ped-miR164b was focused for further study. The cleavage of PeSNAC1 mRNA guided by ped-miR164b was validated using RLM-5' RACE. Tissue-specific expression analysis demonstrated that ped-miR164b had a declining trend from root, sheath, leaf, to that of stem, which was opposite to that of PeSNAC1. Transgenic Arabidopsis plants overexpressing either PeSNAC1 (OX-PeSNAC1) or, ped-miR164b (OX-ped-miR164b) driven by the CaMV35S promoter were generated. OX-ped-miR164b plants showed similar phenotype of cuc2 mutants whose growth was seriously suppressed. Compared with Col-0, sense OX-PeSNAC1 plants grew rapidly and flowered earlier, whereas antisense plants grew slowly and exhibited delayed flowering. Sense OX-PeSNAC1 plants had the greatest number of lateral roots, while antisense OX-PeSNAC1 and OX-ped-miR164b plants had fewer lateral roots than Col-0. Under NaCl and PEG6000 stresses, survival rates were higher and F v/F m values declined more slowly in sense OX-PeSNAC1 plants than in Col-0, with lower survival rates and a more rapid decrease in F v/F m values conversely observed in antisense OX-PeSNAC1 and OX-ped-miR164b plants. These findings indicated that ped-miR164b-targeted PeSNAC1 may play key roles in plant development and tolerance to salinity and drought stresses.

Keywords: Bamboo; F v/F m; Lateral root; NAC; NaCl and drought stresses; RLM-5′ RACE; miR164b; qRT-PCR.

MeSH terms

  • Arabidopsis / genetics
  • Dehydration / genetics
  • Dehydration / physiopathology
  • Ectopic Gene Expression / genetics
  • Gene Expression Regulation, Plant / genetics
  • Gene Expression Regulation, Plant / physiology
  • Genes, Plant / genetics
  • Genes, Plant / physiology*
  • MicroRNAs / genetics
  • MicroRNAs / physiology
  • Plant Roots / genetics
  • Plant Roots / physiology
  • Plants, Genetically Modified / genetics
  • Plants, Genetically Modified / physiology
  • Real-Time Polymerase Chain Reaction
  • Salt Tolerance / genetics
  • Salt Tolerance / physiology
  • Sasa / genetics*
  • Sasa / physiology

Substances

  • MicroRNAs