RNA versatility governs tRNA function: Why tRNA flexibility is essential beyond the translation cycle

Bioessays. 2016 May;38(5):465-73. doi: 10.1002/bies.201500190. Epub 2016 Mar 18.

Abstract

tRNAs undergo multiple conformational changes during the translation cycle that are required for tRNA translocation and proper communication between the ribosome and translation factors. Recent structural data on how destabilized tRNAs utilize the CCA-adding enzyme to proofread themselves put a spotlight on tRNA flexibility beyond the translation cycle. In analogy to tRNA surveillance, this review finds that other processes also exploit versatile tRNA folding to achieve, amongst others, specific aminoacylation, translational regulation by riboswitches or a block of bacterial translation. tRNA flexibility is thereby not restricted to the hinges utilized during translation. In contrast, the flexibility of tRNA is distributed all over its L-shape and is actively exploited by the tRNA-interacting partners to discriminate one tRNA from another. Since the majority of tRNA modifications also modulate tRNA flexibility it seems that cells devote enormous resources to tightly sense and regulate tRNA structure. This is likely required for error-free protein synthesis.

Keywords: CCA-adding enzyme; RNA folding; structural biology; tRNA; translation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Aminoacylation
  • Bacteria / drug effects
  • Bacteria / genetics*
  • Bacteria / metabolism
  • Cinnamates / pharmacology
  • Hygromycin B / analogs & derivatives
  • Hygromycin B / pharmacology
  • Models, Molecular
  • Nucleic Acid Conformation
  • Protein Biosynthesis*
  • RNA Nucleotidyltransferases / genetics
  • RNA Nucleotidyltransferases / metabolism
  • RNA Transport
  • RNA, Transfer / chemistry
  • RNA, Transfer / genetics*
  • RNA, Transfer / metabolism
  • Ribosomes / chemistry
  • Ribosomes / drug effects
  • Ribosomes / metabolism*
  • Riboswitch

Substances

  • Cinnamates
  • Riboswitch
  • Hygromycin B
  • hygromycin A
  • RNA, Transfer
  • RNA Nucleotidyltransferases
  • tRNA nucleotidyltransferase