DNA Sequential Logic Gate Using Two-Ring DNA

ACS Appl Mater Interfaces. 2016 Apr 13;8(14):9370-6. doi: 10.1021/acsami.6b00847. Epub 2016 Mar 30.

Abstract

Sequential DNA detection is a fundamental issue for elucidating the interactive relationships among complex gene systems. Here, a sequential logic DNA gate was achieved by utilizing the two-ring DNA structure, with the ability to recognize "before" and "after" triggering sequences of DNA signals. By taking advantage of a "loop-open" mechanism, separations of two-ring DNAs were controlled. Three triggering pathways with different sequential DNA treatments were distinguished by comparing fluorescent outputs. Programmed nanoparticle arrangement guided by "interlocked" two-ring DNA was also constructed to demonstrate the achievement of designed nanostrucutres. Such sequential logic DNA operation may guide future molecular sensors to monitor more complex gene network in biological systems.

Keywords: DNA logic gate; gold nanoparticle; interlocked structure; sequential detection; two-ring DNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Computers, Molecular*
  • DNA / chemistry*
  • DNA / genetics
  • Gene Regulatory Networks / genetics*
  • Gold / chemistry
  • Metal Nanoparticles / chemistry*
  • Nucleic Acid Conformation

Substances

  • Gold
  • DNA