Interactions of Enolizable Barbiturate Dyes

Chemistry. 2016 Apr 11;22(16):5734-48. doi: 10.1002/chem.201504932. Epub 2016 Mar 4.

Abstract

The specific barbituric acid dyes 1-n-butyl-5-(2,4-dinitro-phenyl) barbituric acid and 1-n-butyl-5-{4-[(1,3-dioxo-1H-inden-(3 H)-ylidene)methyl]phenyl}barbituric acid were used to study complex formation with nucleobase derivatives and related model compounds. The enol form of both compounds shows a strong bathochromic shift of the UV/Vis absorption band compared to the rarely coloured keto form. The keto-enol equilibria of the five studied dyes are strongly dependent on the properties of the environment as shown by solvatochromic studies in ionic liquids and a set of organic solvents. Enol form development of the barbituric acid dyes is also associated with alteration of the hydrogen bonding pattern from the ADA to the DDA type (A=hydrogen bond acceptor site, D=donor site). Receptor-induced altering of ADA towards DDA hydrogen bonding patterns of the chromophores are utilised to study supramolecular complex formation. As complementary receptors 9-ethyladenine, 1-n-butylcytosine, 1-n-butylthymine, 9-ethylguanidine and 2,6-diacetamidopiridine were used. The UV/Vis spectroscopic response of acid-base reaction compared to supramolecular complex formation is evaluated by (1)H NMR titration experiments and X-ray crystal structure analyses. An increased acidity of the barbituric acid derivative promotes genuine salt formation. In contrast, supramolecular complex formation is preferred for the weaker acidic barbituric acid.

Keywords: UV/Vis spectroscopy; barbituric acid; keto-enol tautomerism; molecular recognition; nucleobases; solvatochromism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Barbiturates / chemistry*
  • Coloring Agents / chemistry*
  • Crystallography, X-Ray
  • Hydrogen Bonding
  • Indenes / chemistry*
  • Magnetic Resonance Spectroscopy
  • Nitro Compounds / chemistry*
  • Oxidation-Reduction
  • Solvents / chemistry
  • Ultraviolet Rays

Substances

  • 1-n-butyl-5-(2,4-dinitro-phenyl)barbituric acid
  • 1-n-butyl-5-(4-((1,3-dioxo-1H-inden-(3 H)-ylidene)methyl)phenyl)barbituric acid
  • Barbiturates
  • Coloring Agents
  • Indenes
  • Nitro Compounds
  • Solvents