Isolation and characterization of yeasts associated with plants growing in heavy-metal- and arsenic-contaminated soils

Can J Microbiol. 2016 Apr;62(4):307-19. doi: 10.1139/cjm-2015-0226. Epub 2015 Dec 21.

Abstract

Yeasts were quantified and isolated from the rhizospheres of 5 plant species grown at 2 sites of a Mexican region contaminated with arsenic, lead, and other heavy metals. Yeast abundance was about 10(2) CFU/g of soil and 31 isolates were obtained. On the basis of the phylogenetic analysis of 26S rRNA and internal transcribed spacer fragment, 6 species were identified within the following 5 genera: Cryptococcus (80.64%), Rhodotorula (6.45%), Exophiala (6.45%), Trichosporon (3.22%), and Cystobasidium (3.22%). Cryptococcus spp. was the predominant group. Pectinases (51.6%), proteases (51.6%), and xylanases (41.9%) were the enzymes most common, while poor production of siderophores (16.1%) and indole acetic acid (9.67%) was detected. Isolates of Rhodotorula mucilaginosa and Cystobasidium sloffiae could promote plant growth and seed germination in a bioassay using Brassica juncea. Resistance of isolates by arsenic and heavy metals was as follows: As(3+) ≥ 100 mmol/L, As(5+) ≥ 30 mmol/L, Zn(2+) ≥ 2 mmol/L, Pb(2+) ≥ 1.2 mmol/L, and Cu(2+) ≥ 0.5 mmol/L. Strains of Cryptococcus albidus were able to reduce arsenate (As(5+)) into arsenite (As(3+)), but no isolate was capable of oxidizing As(3+). This is the first study on the abundance and identification of rhizosphere yeasts in a heavy-metal- and arsenic-contaminated soil, and of the reduction of arsenate by the species C. albidus.

Keywords: arsenic; levure; reduction; rhizosphere; rhizosphère; réduction; speciation; spéciation; yeast.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arsenates / metabolism
  • Arsenic / analysis
  • Arsenic / metabolism*
  • Arsenic / pharmacology
  • Arsenites / metabolism
  • Candida albicans / drug effects
  • Candida albicans / isolation & purification
  • Candida albicans / metabolism
  • Cryptococcus / drug effects
  • Cryptococcus / isolation & purification
  • Cryptococcus / metabolism*
  • Germination
  • Indoleacetic Acids / metabolism
  • Magnoliopsida / growth & development
  • Magnoliopsida / microbiology
  • Metals, Heavy / analysis
  • Metals, Heavy / metabolism*
  • Metals, Heavy / pharmacology
  • Microbial Sensitivity Tests
  • Oxidation-Reduction
  • Phylogeny
  • Rhizosphere
  • Seeds / growth & development
  • Seeds / microbiology
  • Soil Microbiology*
  • Soil Pollutants / analysis
  • Soil Pollutants / metabolism*

Substances

  • Arsenates
  • Arsenites
  • Indoleacetic Acids
  • Metals, Heavy
  • Soil Pollutants
  • indoleacetic acid
  • arsenite
  • Arsenic
  • arsenic acid