Hologenome analysis of two marine sponges with different microbiomes

BMC Genomics. 2016 Feb 29:17:158. doi: 10.1186/s12864-016-2501-0.

Abstract

Background: Sponges (Porifera) harbor distinct microbial consortia within their mesohyl interior. We herein analysed the hologenomes of Stylissa carteri and Xestospongia testudinaria, which notably differ in their microbiome content.

Results: Our analysis revealed that S. carteri has an expanded repertoire of immunological domains, specifically Scavenger Receptor Cysteine-Rich (SRCR)-like domains, compared to X. testudinaria. On the microbial side, metatranscriptome analyses revealed an overrepresentation of potential symbiosis-related domains in X. testudinaria.

Conclusions: Our findings provide genomic insights into the molecular mechanisms underlying host-symbiont coevolution and may serve as a roadmap for future hologenome analyses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Genome
  • High-Throughput Nucleotide Sequencing
  • Microbiota / genetics*
  • Models, Genetic
  • Molecular Sequence Annotation
  • Porifera / genetics*
  • Porifera / microbiology*
  • Receptors, Scavenger / genetics
  • Sequence Analysis, DNA
  • Symbiosis
  • Transcriptome

Substances

  • Receptors, Scavenger