Scalable improvement of SPME multipolar electrostatics in anisotropic polarizable molecular mechanics using a general short-range penetration correction up to quadrupoles

J Comput Chem. 2016 Feb 15;37(5):494-506. doi: 10.1002/jcc.24257.

Abstract

We propose a general coupling of the Smooth Particle Mesh Ewald SPME approach for distributed multipoles to a short-range charge penetration correction modifying the charge-charge, charge-dipole and charge-quadrupole energies. Such an approach significantly improves electrostatics when compared to ab initio values and has been calibrated on Symmetry-Adapted Perturbation Theory reference data. Various neutral molecular dimers have been tested and results on the complexes of mono- and divalent cations with a water ligand are also provided. Transferability of the correction is adressed in the context of the implementation of the AMOEBA and SIBFA polarizable force fields in the TINKER-HP software. As the choices of the multipolar distribution are discussed, conclusions are drawn for the future penetration-corrected polarizable force fields highlighting the mandatory need of non-spurious procedures for the obtention of well balanced and physically meaningful distributed moments. Finally, scalability and parallelism of the short-range corrected SPME approach are addressed, demonstrating that the damping function is computationally affordable and accurate for molecular dynamics simulations of complex bio- or bioinorganic systems in periodic boundary conditions.

Keywords: electrostatics; energy decomposition analysis; polarizable force fields.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Anisotropy
  • Benzene / chemistry*
  • Cations, Divalent
  • Cations, Monovalent
  • Dimerization
  • Kinetics
  • Mechanical Phenomena*
  • Molecular Dynamics Simulation*
  • Quantum Theory
  • Software*
  • Solutions
  • Static Electricity
  • Thermodynamics
  • Water / chemistry*

Substances

  • Cations, Divalent
  • Cations, Monovalent
  • Solutions
  • Water
  • Benzene