Isolation and Biosynthetic Analysis of Haliamide, a New PKS-NRPS Hybrid Metabolite from the Marine Myxobacterium Haliangium ochraceum

Molecules. 2016 Jan 6;21(1):59. doi: 10.3390/molecules21010059.

Abstract

Myxobacteria of marine origin are rare and hard-to-culture microorganisms, but they genetically harbor high potential to produce novel antibiotics. An extensive investigation on the secondary metabolome of the unique marine myxobacterium Haliangium ochraceum SMP-2 led to the isolation of a new polyketide-nonribosomal peptide hybrid product, haliamide (1). Its structure was elucidated by spectroscopic analyses including NMR and HR-MS. Haliamide (1) showed cytotoxicity against HeLa-S3 cells with IC50 of 12 μM. Feeding experiments were performed to identify the biosynthetic building blocks of 1, revealing one benzoate, one alanine, two propionates, one acetate and one acetate-derived terminal methylene. The biosynthetic gene cluster of haliamide (hla, 21.7 kbp) was characterized through the genome mining of the producer, allowing us to establish a model for the haliamide biosynthesis. The sulfotransferase (ST)-thioesterase (TE) domains encoded in hlaB appears to be responsible for the terminal alkene formation via decarboxylation.

Keywords: Haliangium ochraceum; biosynthesis; haliamide; marine myxobacterium; polyketide.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Agents / isolation & purification
  • Antineoplastic Agents / metabolism*
  • Antineoplastic Agents / pharmacology
  • Aquatic Organisms
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Cell Survival / drug effects
  • Deltaproteobacteria / chemistry
  • Deltaproteobacteria / genetics
  • Deltaproteobacteria / metabolism*
  • Gene Expression
  • HeLa Cells
  • Humans
  • Inhibitory Concentration 50
  • Metabolome*
  • Multigene Family
  • Peptides / isolation & purification
  • Peptides / metabolism*
  • Peptides / pharmacology
  • Polyketides / isolation & purification
  • Polyketides / metabolism*
  • Polyketides / pharmacology
  • Protein Structure, Tertiary
  • Sulfotransferases / chemistry
  • Sulfotransferases / genetics
  • Sulfotransferases / metabolism
  • Thiolester Hydrolases / chemistry
  • Thiolester Hydrolases / genetics
  • Thiolester Hydrolases / metabolism

Substances

  • Antineoplastic Agents
  • Bacterial Proteins
  • Peptides
  • Polyketides
  • Sulfotransferases
  • Thiolester Hydrolases