Paracoccus gahaiensis sp. nov. isolated from sediment of Gahai Lake, Qinghai-Tibetan Plateau, China

Arch Microbiol. 2016 Apr;198(3):227-32. doi: 10.1007/s00203-015-1184-2. Epub 2016 Jan 7.

Abstract

An aerobic, orange-pigmented, Gram-negative, coccoid bacterium, named CUG 00006(T), was isolated from the sediment of Gahai Lake, Qinghai Province, China. This organism was alkaline and grew optimally at pH 9 and 20 °C in the presence of 4 % (w/v) NaCl. Strain CUG 00006(T) contained Q-10 as the major isoprenoid quinone and C18:1ω7c as the main fatty acids. The DNA G + C content was 67.8 mol%. The analysis of 16S rRNA gene sequences indicated that strain CUG 00006(T) was phylogenetically related to members of the genus Paracoccus, with the similarities ranging from 93.5 to 97.9 %. In particular, strain CUG 00006(T) was closely related to P. marcusii DSM 11574(T) (97.7 %), P. haeundaensis KCCM 10460(T) (97.8 %), and P. carotinifaciens IFO 16121(T) (97.7 %). On the basis of phylogenetic, physiological, and biochemical characterization, strain CUG 00006(T) is described as a new species of the genus Paracoccus, for which the name Paracoccus gahaiensis sp. nov. is proposed. The type strain is strain CUG 00006(T) (=CCTCC M 2014217(T) = KCTC 42687(T)).

Keywords: 16S rRNA gene; Bacteria; Paracoccus gahaiensis sp. nov..

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • China
  • Fatty Acids / analysis
  • Geologic Sediments / microbiology*
  • Lakes / microbiology
  • Molecular Sequence Data
  • Paracoccus / classification*
  • Paracoccus / genetics
  • Paracoccus / isolation & purification
  • Phylogeny*
  • Quinones / analysis
  • RNA, Ribosomal, 16S / genetics
  • Species Specificity

Substances

  • Fatty Acids
  • Quinones
  • RNA, Ribosomal, 16S