HIV-1 Capsid Stabilization Assay

Methods Mol Biol. 2016:1354:39-47. doi: 10.1007/978-1-4939-3046-3_3.

Abstract

The stability of the HIV-1 core in the cytoplasm is crucial for productive HIV-1 infection. Mutations that stabilize or destabilize the core showed defects in HIV-1 reverse transcription and infection. We developed a novel and simple assay to measure stability of in vitro-assembled HIV-1 CA-NC complexes. This assay allowed us to demonstrate that cytosolic extracts strongly stabilize the HIV-1 core (Fricke et al., J Virol 87:10587-10597, 2013). By using our novel assay, one can measure the ability of different drugs to modulate the stability of in vitro-assembled HIV-1 CA-NC complexes, such as PF74, CAP-1, IXN-053, cyclosporine A, Bi2, and the peptide CAI. We also found that purified CPSF6 (1-321) protein stabilizes in vitro-assembled HIV-1 CA-NC complexes (Fricke et al., J Virol 87:10587-10597, 2013). Here we describe in detail the use of this capsid stability assay. We believe that our assay can be a powerful tool to assess HIV-1 capsid stability in vitro.

Keywords: Capsid; Core; HIV-1; Stability; Uncoating.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Anti-HIV Agents / pharmacology
  • Blotting, Western / methods
  • Capsid / chemistry*
  • Capsid / drug effects
  • Capsid Proteins / chemistry*
  • Electrophoresis, Polyacrylamide Gel / methods
  • HIV Infections / drug therapy
  • HIV Infections / virology*
  • HIV-1 / chemistry*
  • HIV-1 / drug effects
  • Humans
  • Microbial Sensitivity Tests / methods
  • Protein Stability / drug effects
  • Ultracentrifugation / methods
  • Virus Uncoating / drug effects

Substances

  • Anti-HIV Agents
  • Capsid Proteins