Structural studies on chimeric Sesbania mosaic virus coat protein: Revisiting SeMV assembly

Virology. 2016 Feb:489:34-43. doi: 10.1016/j.virol.2015.11.029. Epub 2015 Dec 17.

Abstract

The capsid protein (CP) of Sesbania mosaic virus (SeMV, a T=3 plant virus) consists of a disordered N-terminal R-domain and an ordered S-domain. Removal of the R-domain results in the formation of T=1 particles. In the current study, the R-domain was replaced with unrelated polypeptides of similar lengths: the B-domain of Staphylococcus aureus SpA, and SeMV encoded polypeptides P8 and P10. The chimeric proteins contained T=3 or larger virus-like particles (VLPs) and could not be crystallized. The presence of metal ions during purification resulted in a large number of heterogeneous nucleoprotein complexes. N∆65-B (R domain replaced with B domain) could also be purified in a dimeric form. Its crystal structure revealed T=1 particles devoid of metal ions and the B-domain was disordered. However, the B-domain was functional in N∆65-B VLPs, suggesting possible biotechnological applications. These studies illustrate the importance of N-terminal residues, metal ions and robustness of the assembly process.

Keywords: Chimeric VLPs; Coat protein; R-domain; S. aureus B-domain; SeMV; SeMV assembly; SeMV polypeptides P10 and P8; Virus nano-particles.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Capsid Proteins / chemistry*
  • Capsid Proteins / genetics
  • Capsid Proteins / metabolism*
  • Crystallography, X-Ray
  • Metals / metabolism
  • Models, Molecular
  • Protein Structure, Tertiary
  • RNA Viruses / chemistry
  • RNA Viruses / genetics
  • RNA Viruses / metabolism*

Substances

  • Capsid Proteins
  • Metals