Advances in genomics, transcriptomics and proteomics of toxin-producing cyanobacteria

Environ Microbiol Rep. 2016 Feb;8(1):3-13. doi: 10.1111/1758-2229.12366. Epub 2016 Jan 22.

Abstract

A common misconception persists that the genomes of toxic and non-toxic cyanobacterial strains are largely conserved with the exception of the presence or absence of the genes responsible for toxin production. Implementation of -omics era technologies has challenged this paradigm, with comparative analyses providing increased insight into the differences between strains of the same species. The implementation of genomic, transcriptomic and proteomic approaches has revealed distinct profiles between toxin-producing and non-toxic strains. Further, metagenomics and metaproteomics highlight the genomic potential and functional state of toxic bloom events over time. In this review, we highlight how these technologies have shaped our understanding of the complex relationship between these molecules, their producers and the environment at large within which they persist.

Publication types

  • Review

MeSH terms

  • Bacterial Toxins / metabolism*
  • Cyanobacteria / chemistry*
  • Cyanobacteria / genetics*
  • Cyanobacteria / metabolism
  • Gene Expression Profiling / methods*
  • Gene Expression Profiling / trends
  • Genomics / methods*
  • Genomics / trends
  • Proteomics / methods*
  • Proteomics / trends

Substances

  • Bacterial Toxins