Protein-like proton exchange in a synthetic host cavity

Proc Natl Acad Sci U S A. 2015 Dec 15;112(50):15303-7. doi: 10.1073/pnas.1515639112. Epub 2015 Nov 30.

Abstract

The mechanism of proton exchange in a metal-ligand enzyme active site mimic (compound 1) is described through amide hydrogen-deuterium exchange kinetics. The type and ratio of cationic guest to host in solution affect the rate of isotope exchange, suggesting that the rate of exchange is driven by a host whose cavity is occupied by water. Rate constants for acid-, base-, and water-mediated proton exchange vary by orders of magnitude depending on the guest, and differ by up to 200 million-fold relative to an alanine polypeptide. These results suggest that the unusual microenvironment of the cavity of 1 can dramatically alter the reactivity of associated water by magnitudes comparable to that of enzymes.

Keywords: catalysis; hydrogen–deuterium exchange; noncovalent; proton; supramolecular.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alanine / chemistry
  • Alanine / metabolism
  • Amides / chemistry
  • Deuterium Exchange Measurement*
  • Enzymes / chemistry
  • Enzymes / metabolism
  • Hydrogen Bonding
  • Hydrogen-Ion Concentration
  • Kinetics
  • Models, Molecular
  • Proteins / chemistry*
  • Proteins / metabolism*
  • Protons*
  • Solutions
  • Time Factors
  • Water

Substances

  • Amides
  • Enzymes
  • Proteins
  • Protons
  • Solutions
  • Water
  • Alanine