Genome-wide Screening of Regulators of Catalase Expression: ROLE OF A TRANSCRIPTION COMPLEX AND HISTONE AND tRNA MODIFICATION COMPLEXES ON ADAPTATION TO STRESS

J Biol Chem. 2016 Jan 8;291(2):790-9. doi: 10.1074/jbc.M115.696658. Epub 2015 Nov 13.

Abstract

In response to environmental cues, the mitogen-activated protein kinase Sty1-driven signaling cascade activates hundreds of genes to induce a robust anti-stress cellular response in fission yeast. Thus, upon stress imposition Sty1 transiently accumulates in the nucleus where it up-regulates transcription through the Atf1 transcription factor. Several regulators of transcription and translation have been identified as important to mount an integral response to oxidative stress, such as the Spt-Ada-Gcn5-acetyl transferase or Elongator complexes, respectively. With the aim of identifying new regulators of this massive gene expression program, we have used a GFP-based protein reporter and screened a fission yeast deletion collection using flow cytometry. We find that the levels of catalase fused to GFP, both before and after a threat of peroxides, are altered in hundreds of strains lacking components of chromatin modifiers, transcription complexes, and modulators of translation. Thus, the transcription elongation complex Paf1, the histone methylase Set1-COMPASS, and the translation-related Trm112 dimers are all involved in full expression of Ctt1-GFP and in wild-type tolerance to peroxides.

Keywords: Schizosaccharomyces pombe; catalase; gene expression; stress response; transfer RNA (tRNA).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptation, Physiological / drug effects
  • Adaptation, Physiological / genetics*
  • Catalase / metabolism*
  • Flow Cytometry
  • Gene Deletion
  • Gene Expression Regulation, Fungal / drug effects
  • Genes, Fungal
  • Genes, Reporter
  • Genetic Testing*
  • Genome, Fungal
  • Green Fluorescent Proteins / metabolism
  • Histones / metabolism*
  • Hydrogen Peroxide / pharmacology
  • Multiprotein Complexes / metabolism
  • Oxidative Stress / drug effects
  • Oxidative Stress / genetics
  • Phenotype
  • Protein Biosynthesis / drug effects
  • RNA, Transfer / metabolism*
  • Schizosaccharomyces / drug effects
  • Schizosaccharomyces / genetics*
  • Schizosaccharomyces / physiology
  • Schizosaccharomyces pombe Proteins / metabolism
  • Signal Transduction / drug effects
  • Signal Transduction / genetics
  • Stress, Physiological / drug effects
  • Stress, Physiological / genetics*
  • Transcription, Genetic* / drug effects

Substances

  • Histones
  • Multiprotein Complexes
  • Schizosaccharomyces pombe Proteins
  • Green Fluorescent Proteins
  • RNA, Transfer
  • Hydrogen Peroxide
  • Catalase