Genetic studies of Russian patients with amyotrophic lateral sclerosis

Amyotroph Lateral Scler Frontotemporal Degener. 2015;17(1-2):135-41. doi: 10.3109/21678421.2015.1107100. Epub 2015 Nov 9.

Abstract

Our objective was to search for mutations in genes SOD1, TARDBP, C9orf72, ANG, ATXN2 and VEGF in Russian patients with amyotrophic lateral sclerosis (ALS). A group of 208 Russian patients with ALS was examined. Molecular genetic analysis was conducted using direct sequencing, fragment analysis, and real-time PCR. We found eight different point mutations in the SOD1 gene, with the frequency of mutations being 50% in familial ALS and 3% in sporadic ALS. No mutations were found in exon 6 of the TARDBP gene; however, deletion c.715-126delG in intron 5 of TARDBP was over-represented in ALS patients compared to controls (38% vs. 26.6%; χ(2 )= 13.17; p = 0.002). Hexanucleotide repeat expansion of the C9orf72 gene was revealed in 2.5% of sporadic ALS patients. Mutations in the ANG gene were identified in 1.5% of sporadic ALS patients. The presence of an intermediate number (28-33) of GAC repeats in the ATXN2 gene was observed significantly more often in the study group compared to the control group (5% vs. 1.7%; χ(2 )= 3.89; p = 0.0486). In the cohort examined, we found an association between the disease and the risk A-allele and the A/A genotype at the -2578С/А locus of the VEGF gene. In conclusion, we determined for the first time the genetic basis of ALS in a Russian population.

Keywords: DNA; Genetics; RNA; SOD1; risk.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Amyotrophic Lateral Sclerosis / epidemiology*
  • Amyotrophic Lateral Sclerosis / genetics*
  • Ataxin-2 / genetics*
  • C9orf72 Protein
  • DNA-Binding Proteins / genetics*
  • Evidence-Based Medicine
  • Female
  • Genetic Markers / genetics
  • Genetic Predisposition to Disease / epidemiology
  • Genetic Predisposition to Disease / genetics
  • Humans
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide / genetics
  • Prevalence
  • Proteins / genetics*
  • Reproducibility of Results
  • Risk Assessment
  • Russia / epidemiology
  • Sensitivity and Specificity
  • Superoxide Dismutase / genetics*
  • Superoxide Dismutase-1
  • Vascular Endothelial Growth Factor A / genetics
  • Young Adult

Substances

  • ATXN2 protein, human
  • Ataxin-2
  • C9orf72 Protein
  • C9orf72 protein, human
  • DNA-Binding Proteins
  • Genetic Markers
  • Proteins
  • SOD1 protein, human
  • TARDBP protein, human
  • VEGFA protein, human
  • Vascular Endothelial Growth Factor A
  • Superoxide Dismutase
  • Superoxide Dismutase-1