Iterative polyketide biosynthesis by modular polyketide synthases in bacteria

Appl Microbiol Biotechnol. 2016 Jan;100(2):541-57. doi: 10.1007/s00253-015-7093-0. Epub 2015 Nov 9.

Abstract

Modular polyketide synthases (type I PKSs) in bacteria are responsible for synthesizing a significant percentage of bioactive natural products. This group of synthases has a characteristic modular organization, and each module within a PKS carries out one cycle of polyketide chain elongation; thus each module is non-iterative in function. It was possible to predict the basic structure of a polyketide product from the module organization of the PKSs, since there generally existed a co-linearity between the number of modules and the number of chain elongations. However, more and more bacterial modular PKSs fail to conform to the canonical rules, and a particularly noteworthy group of non-canonical PKSs is the bacterial iterative type I PKSs. This review covers recent examples of iteratively used modular PKSs in bacteria. These non-canonical PKSs give rise to a large array of natural products with impressive structural diversity. The molecular mechanism behind the iterations is often unclear, presenting a new challenge to the rational engineering of these PKSs with the goal of generating new natural products. Structural elucidation of these synthase complexes and better understanding of potential PKS-PKS interactions as well as PKS-substrate recognition may provide new prospects and inspirations for the discovery and engineering of new bioactive polyketides.

Keywords: Biosynthesis; Iterative PKS; Natural products; Polyketides; Type I PKS.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Amino Acid Sequence
  • Bacteria / enzymology
  • Bacteria / metabolism*
  • Biological Products / metabolism
  • Biosynthetic Pathways
  • Polyketide Synthases / metabolism*
  • Polyketides / metabolism*
  • Secondary Metabolism
  • Substrate Specificity

Substances

  • Biological Products
  • Polyketides
  • Polyketide Synthases