Rational design of a monomeric and photostable far-red fluorescent protein for fluorescence imaging in vivo

Protein Sci. 2016 Feb;25(2):308-15. doi: 10.1002/pro.2843. Epub 2015 Dec 31.

Abstract

Fluorescent proteins (FPs) are powerful tools for cell and molecular biology. Here based on structural analysis, a blue-shifted mutant of a recently engineered monomeric infrared fluorescent protein (mIFP) has been rationally designed. This variant, named iBlueberry, bears a single mutation that shifts both excitation and emission spectra by approximately 40 nm. Furthermore, iBlueberry is four times more photostable than mIFP, rendering it more advantageous for imaging protein dynamics. By tagging iBlueberry to centrin, it has been demonstrated that the fusion protein labels the centrosome in the developing zebrafish embryo. Together with GFP-labeled nucleus and tdTomato-labeled plasma membrane, time-lapse imaging to visualize the dynamics of centrosomes in radial glia neural progenitors in the intact zebrafish brain has been demonstrated. It is further shown that iBlueberry can be used together with mIFP in two-color protein labeling in living cells and in two-color tumor labeling in mice.

Keywords: bacterial phytochrome; fluorescence imaging; fluorescent proteins; rational design.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line, Tumor
  • Drosophila / ultrastructure
  • Female
  • Fluorescent Dyes / analysis*
  • Fluorescent Dyes / metabolism
  • HEK293 Cells
  • Humans
  • Luminescent Proteins / analysis*
  • Luminescent Proteins / genetics
  • Mice
  • Mice, Inbred BALB C
  • Models, Molecular
  • Mutagenesis, Site-Directed
  • Mutation
  • Neoplasms / diagnosis
  • Optical Imaging / methods*
  • Photobleaching
  • Protein Conformation
  • Protein Stability
  • Red Fluorescent Protein
  • Zebrafish / embryology

Substances

  • Fluorescent Dyes
  • Luminescent Proteins

Associated data

  • PDB/2VEA
  • PDB/4CQH