The nature of the CO2 -concentrating mechanisms in a marine diatom, Thalassiosira pseudonana

New Phytol. 2016 Mar;209(4):1417-27. doi: 10.1111/nph.13728. Epub 2015 Nov 3.

Abstract

Diatoms are widespread in aquatic ecosystems where they may be limited by the supply of inorganic carbon. Their carbon dioxide-concentrating mechanisms (CCMs) involving transporters and carbonic anhydrases (CAs) are well known, but the contribution of a biochemical CCM involving C4 metabolism is contentious. The CCM(s) present in the marine-centric diatom, Thalassiosira pseudonana, were studied in cells exposed to high or low concentrations of CO2 , using a range of approaches. At low CO2 , cells possessed a CCM based on active uptake of CO2 (70% contribution) and bicarbonate, while at high CO2 , cells were restricted to CO2 . CA was highly and rapidly activated on transfer to low CO2 and played a key role because inhibition of external CA produced uptake kinetics similar to cells grown at high CO2 . The activities of phosphoenolpyruvate (PEP) carboxylase (PEPC) and the PEP-regenerating enzyme, pyruvate phosphate dikinase (PPDK), were lower in cells grown at low than at high CO2 . The ratios of PEPC and PPDK to ribulose bisphosphate carboxylase were substantially lower than 1, even at low CO2 . Our data suggest that the kinetic properties of this species results from a biophysical CCM and not from C4 type metabolism.

Keywords: Bicarbonate use; CO 2; Thalassiosira pseudonana; carbon dioxide-concentrating mechanism (CCM); diatom; photosynthesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetazolamide / pharmacology
  • Aquatic Organisms / drug effects
  • Aquatic Organisms / growth & development
  • Aquatic Organisms / metabolism*
  • Bicarbonates / pharmacology
  • Carbon Dioxide / metabolism*
  • Carbon Dioxide / pharmacology
  • Carbonic Anhydrases / metabolism
  • Diatoms / drug effects
  • Diatoms / enzymology
  • Diatoms / growth & development
  • Diatoms / metabolism*
  • Enzyme Activation / drug effects
  • Hydrogen-Ion Concentration
  • Kinetics
  • Photosynthesis / drug effects
  • Ribulose-Bisphosphate Carboxylase / metabolism
  • Time Factors

Substances

  • Bicarbonates
  • Carbon Dioxide
  • Ribulose-Bisphosphate Carboxylase
  • Carbonic Anhydrases
  • Acetazolamide