Bacillus cereus AR156 primes induced systemic resistance by suppressing miR825/825* and activating defense-related genes in Arabidopsis

J Integr Plant Biol. 2016 Apr;58(4):426-39. doi: 10.1111/jipb.12446. Epub 2016 Feb 5.

Abstract

Small RNAs play an important role in plant immune responses. However, their regulatory function in induced systemic resistance (ISR) is nascent. Bacillus cereus AR156 is a plant growth-promoting rhizobacterium that induces ISR in Arabidopsis against bacterial infection. Here, by comparing small RNA profiles of Pseudomonas syringae pv. tomato (Pst) DC3000-infected Arabidopsis with and without AR156 pretreatment, we identified a group of Arabidopsis microRNAs (miRNAs) that are differentially regulated by AR156 pretreatment. miR825 and miR825* are two miRNA generated from a single miRNA gene. Northern blot analysis indicated that they were significantly downregulated in Pst DC3000-infected plants pretreated with AR156, in contrast to the plants without AR156 pretreatment. miR825 targets two ubiquitin-protein ligases, while miR825* targets toll-interleukin-like receptor (TIR)-nucleotide binding site (NBS) and leucine-rich repeat (LRR) type resistance (R) genes. The expression of these target genes negatively correlated with the expression of miR825 and miR825*. Moreover, transgenic plants showing reduced expression of miR825 and miR825* displayed enhanced resistance to Pst DC3000 infection, whereas transgenic plants overexpressing miR825 and miR825* were more susceptible. Taken together, our data indicates that Bacillus cereus AR156 pretreatment primes ISR to Pst infection by suppressing miR825 and miR825* and activating the defense related genes they targeted.

Keywords: ISR; Induced systemic resistance; microRNA; plant innate immunity; small RNA.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Arabidopsis / genetics*
  • Arabidopsis / immunology
  • Arabidopsis / microbiology*
  • Bacillus cereus / physiology*
  • Base Sequence
  • Disease Resistance / genetics*
  • Gene Expression Profiling
  • Gene Expression Regulation, Plant
  • Gene Knockdown Techniques
  • Genes, Plant
  • Genetic Loci
  • MicroRNAs / genetics*
  • MicroRNAs / metabolism
  • Plant Diseases / genetics*
  • Plant Diseases / microbiology*
  • Plants, Genetically Modified
  • Pseudomonas syringae / physiology
  • RNA, Small Interfering / metabolism

Substances

  • MIRN825 microRNA, Arabidopsis
  • MicroRNAs
  • RNA, Small Interfering