Deterministic multidimensional nonuniform gap sampling

J Magn Reson. 2015 Dec:261:19-26. doi: 10.1016/j.jmr.2015.09.016. Epub 2015 Oct 23.

Abstract

Born from empirical observations in nonuniformly sampled multidimensional NMR data relating to gaps between sampled points, the Poisson-gap sampling method has enjoyed widespread use in biomolecular NMR. While the majority of nonuniform sampling schemes are fully randomly drawn from probability densities that vary over a Nyquist grid, the Poisson-gap scheme employs constrained random deviates to minimize the gaps between sampled grid points. We describe a deterministic gap sampling method, based on the average behavior of Poisson-gap sampling, which performs comparably to its random counterpart with the additional benefit of completely deterministic behavior. We also introduce a general algorithm for multidimensional nonuniform sampling based on a gap equation, and apply it to yield a deterministic sampling scheme that combines burst-mode sampling features with those of Poisson-gap schemes. Finally, we derive a relationship between stochastic gap equations and the expectation value of their sampling probability densities.

Keywords: Deterministic sampling; NMR; NUS; Poisson-gap.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Algorithms
  • Fourier Analysis
  • Nuclear Magnetic Resonance, Biomolecular / methods*
  • Poisson Distribution
  • Stochastic Processes