The RNF138 E3 ligase displaces Ku to promote DNA end resection and regulate DNA repair pathway choice

Nat Cell Biol. 2015 Nov;17(11):1446-57. doi: 10.1038/ncb3259. Epub 2015 Oct 26.

Abstract

DNA double-strand breaks (DSBs) are repaired mainly by non-homologous end joining or homologous recombination (HR). Cell cycle stage and DNA end resection are believed to regulate the commitment to HR repair. Here we identify RNF138 as a ubiquitin E3 ligase that regulates the HR pathway. RNF138 is recruited to DNA damage sites through zinc fingers that have a strong preference for DNA with 5'- or 3'-single-stranded overhangs. RNF138 stimulates DNA end resection and promotes ATR-dependent signalling and DSB repair by HR, thereby contributing to cell survival on exposure to DSB-inducing agents. Finally, we establish that RNF138-dependent Ku removal from DNA breaks is one mechanism whereby RNF138 can promote HR. These results establish RNF138 as an important regulator of DSB repair pathway choice.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ataxia Telangiectasia Mutated Proteins / metabolism
  • Cell Line, Tumor
  • DNA Breaks, Double-Stranded*
  • DNA End-Joining Repair
  • DNA Helicases / genetics
  • DNA Helicases / metabolism*
  • DNA Repair*
  • DNA, Neoplasm / genetics
  • DNA, Neoplasm / metabolism*
  • DNA, Single-Stranded / genetics
  • DNA, Single-Stranded / metabolism
  • HEK293 Cells
  • HeLa Cells
  • Humans
  • Immunoblotting
  • Ku Autoantigen
  • Luminescent Proteins / genetics
  • Luminescent Proteins / metabolism
  • MCF-7 Cells
  • Microscopy, Confocal
  • Mutation
  • Protein Binding
  • RNA Interference
  • Recombinational DNA Repair
  • Ubiquitin-Protein Ligases / genetics
  • Ubiquitin-Protein Ligases / metabolism*
  • Ubiquitination

Substances

  • DNA, Neoplasm
  • DNA, Single-Stranded
  • Luminescent Proteins
  • RNF138 protein, human
  • Ubiquitin-Protein Ligases
  • ATR protein, human
  • Ataxia Telangiectasia Mutated Proteins
  • DNA Helicases
  • XRCC5 protein, human
  • Ku Autoantigen