Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo-, but not by DNA polymerase ζ

J Biochem. 2016 Mar;159(3):323-9. doi: 10.1093/jb/mvv103. Epub 2015 Oct 21.

Abstract

Guanine is the most easily oxidized of the four DNA bases, and contiguous guanines (GG) in a sequence are more readily oxidized than a single guanine in a sequence. Continued oxidation of GGs results in a contiguous oxidized guanine lesion. Two contiguous 2,5-diamino-4H-imidazol-4-ones, an oxidized form of guanine that hydrolyses to 2,2,4-triamino-5(2H)-oxazolone (Oz), are detected following the oxidation of GG. In this study, we analysed translesion synthesis (TLS) across two contiguous Oz molecules (OzOz) using Klenow Fragment exo(-) (KF exo(-)) and DNA polymerases (Pols) α, β, ζ, η, ι, κ and REV1. We found that KF exo(-) and Pols α, β, ι and REV1 inserted one nucleotide opposite the 3' Oz of OzOz and stalled at the subsequent extension, and that Pol κ incorporated no nucleotide. Pol η only inefficiently elongated the primer up to full-length across OzOz; the synthesis of most DNA strands stalled at the 3' or 5' Oz of OzOz. Surprisingly, however, Pol ζ efficiently extended the primer up to full-length across OzOz, unlike the other DNA polymerases, but catalysed error-prone nucleotide incorporation. We therefore believe that Pol ζ is required for efficient TLS of OzOz. These results show that OzOz obstructs DNA synthesis by DNA polymerases except Pol ζ.

Keywords: 2,2,4-triamino-5(2H)-oxazolone; DNA polymerase; contiguous damage; oxidation of guanine; translesion synthesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA / biosynthesis*
  • DNA Damage
  • DNA Polymerase I / chemistry
  • DNA Primers / metabolism
  • DNA Repair
  • DNA Replication*
  • DNA-Directed DNA Polymerase / chemistry*
  • Enzyme Assays
  • Guanidines / chemistry*
  • Guanine / chemistry*
  • Humans
  • Nuclear Proteins / chemistry*
  • Nucleotidyltransferases / chemistry*
  • Oxidation-Reduction

Substances

  • 2,2,4-triamino-5(2H)-oxazolone
  • DNA Primers
  • Guanidines
  • Nuclear Proteins
  • Guanine
  • DNA
  • Nucleotidyltransferases
  • REV1 protein, human
  • DNA Polymerase I
  • DNA-Directed DNA Polymerase