NO binding kinetics in myoglobin investigated by picosecond Fe K-edge absorption spectroscopy

Proc Natl Acad Sci U S A. 2015 Oct 20;112(42):12922-7. doi: 10.1073/pnas.1424446112. Epub 2015 Oct 5.

Abstract

Diatomic ligands in hemoproteins and the way they bind to the active center are central to the protein's function. Using picosecond Fe K-edge X-ray absorption spectroscopy, we probe the NO-heme recombination kinetics with direct sensitivity to the Fe-NO binding after 532-nm photoexcitation of nitrosylmyoglobin (MbNO) in physiological solutions. The transients at 70 and 300 ps are identical, but they deviate from the difference between the static spectra of deoxymyoglobin and MbNO, showing the formation of an intermediate species. We propose the latter to be a six-coordinated domed species that is populated on a timescale of ∼ 200 ps by recombination with NO ligands. This work shows the feasibility of ultrafast pump-probe X-ray spectroscopic studies of proteins in physiological media, delivering insight into the electronic and geometric structure of the active center.

Keywords: X-ray absorption; ligand binding; nitrosylmyoglobin; picosecond; pump–probe.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Kinetics
  • Ligands
  • Myoglobin / metabolism*
  • Nitric Oxide / metabolism*
  • Spectrum Analysis / methods*

Substances

  • Ligands
  • Myoglobin
  • myoglobin nitroxide
  • Nitric Oxide