Homocitrullination Is a Novel Histone H1 Epigenetic Mark Dependent on Aryl Hydrocarbon Receptor Recruitment of Carbamoyl Phosphate Synthase 1

J Biol Chem. 2015 Nov 13;290(46):27767-78. doi: 10.1074/jbc.M115.678144. Epub 2015 Sep 30.

Abstract

The aryl hydrocarbon receptor (AhR), a regulator of xenobiotic toxicity, is a member of the eukaryotic Per-Arnt-Sim domain protein family of transcription factors. Recent evidence identified a novel AhR DNA recognition sequence called the nonconsensus xenobiotic response element (NC-XRE). AhR binding to the NC-XRE in response to activation by the canonical ligand 2,3,7,8-tetrachlorodibenzo-p-dioxin resulted in concomitant recruitment of carbamoyl phosphate synthase 1 (CPS1) to the NC-XRE. Studies presented here demonstrate that CPS1 is a bona fide nuclear protein involved in homocitrullination (hcit), including a key lysine residue on histone H1 (H1K34hcit). H1K34hcit represents a hitherto unknown epigenetic mark implicated in enhanced gene expression of the peptidylarginine deiminase 2 gene, itself a chromatin-modifying protein. Collectively, our data suggest that AhR activation promotes CPS1 recruitment to DNA enhancer sites in the genome, resulting in a specific enzyme-independent post-translational modification of the linker histone H1 protein (H1K34hcit), pivotal in altering local chromatin structure and transcriptional activation.

Keywords: aryl hydrocarbon receptor (AhR) (AHR); chromatin modification; dioxin; gene regulation; hepatocyte.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Base Sequence
  • Basic Helix-Loop-Helix Transcription Factors / metabolism*
  • Carbamoyl-Phosphate Synthase (Ammonia) / metabolism*
  • Cells, Cultured
  • Chromatin / metabolism
  • Chromatin / ultrastructure
  • Citrulline / analogs & derivatives*
  • Citrulline / metabolism
  • Epigenesis, Genetic*
  • Female
  • Histones / metabolism*
  • Hydrolases / genetics
  • Lysine / metabolism
  • Mice
  • Mice, Inbred C57BL
  • Nuclear Proteins / metabolism*
  • Polychlorinated Dibenzodioxins / metabolism
  • Protein Binding
  • Protein Processing, Post-Translational
  • Protein Structure, Tertiary
  • Protein-Arginine Deiminases
  • Receptors, Aryl Hydrocarbon / metabolism*
  • Response Elements
  • Transcriptional Activation

Substances

  • Ahr protein, mouse
  • Basic Helix-Loop-Helix Transcription Factors
  • Chromatin
  • Histones
  • Nuclear Proteins
  • Polychlorinated Dibenzodioxins
  • Receptors, Aryl Hydrocarbon
  • homocitrulline
  • Citrulline
  • Hydrolases
  • Protein-Arginine Deiminases
  • Carbamoyl-Phosphate Synthase (Ammonia)
  • Lysine