MGDB: a comprehensive database of genes involved in melanoma

Database (Oxford). 2015 Sep 30:2015:bav097. doi: 10.1093/database/bav097. Print 2015.

Abstract

The Melanoma Gene Database (MGDB) is a manually curated catalog of molecular genetic data relating to genes involved in melanoma. The main purpose of this database is to establish a network of melanoma related genes and to facilitate the mechanistic study of melanoma tumorigenesis. The entries describing the relationships between melanoma and genes in the current release were manually extracted from PubMed abstracts, which contains cumulative to date 527 human melanoma genes (422 protein-coding and 105 non-coding genes). Each melanoma gene was annotated in seven different aspects (General Information, Expression, Methylation, Mutation, Interaction, Pathway and Drug). In addition, manually curated literature references have also been provided to support the inclusion of the gene in MGDB and establish its association with melanoma. MGDB has a user-friendly web interface with multiple browse and search functions. We hoped MGDB will enrich our knowledge about melanoma genetics and serve as a useful complement to the existing public resources. Database URL: http://bioinfo.ahu.edu.cn:8080/Melanoma/index.jsp.

Publication types

  • Dataset
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Databases, Genetic*
  • Genes, Neoplasm*
  • Humans
  • Melanoma* / genetics
  • Melanoma* / metabolism
  • Neoplasm Proteins* / genetics
  • Neoplasm Proteins* / metabolism
  • User-Computer Interface*

Substances

  • Neoplasm Proteins