A Novel Three Domains Glycoside Hydrolase Family 3 from Sclerotinia sclerotiorum Exhibits β-Glucosidase and Exoglucanase Activities: Molecular, Biochemical, and Transglycosylation Potential Analysis

Mol Biotechnol. 2015 Dec;57(11-12):993-1002. doi: 10.1007/s12033-015-9892-z.

Abstract

The filamentous fungus Sclerotinia sclerotiorum produces a complete set of cellulolytic enzymes. We report here the purification and the biochemical characterization of a new β-glucosidase from S. sclerotiorum which belongs to the family 3 of glycoside hydrolases and that was named as SsBgl3. After two size-exclusion chromatography steps, purified protein bands of 80 and 90 kDa from SDS-PAGE were subjected to a mass spectrometry analysis. The results displayed four peptides from the upper band belonging to a polypeptide of 777 amino acids having a calculated molecular weight of 83.7 kDa. Biochemical analysis has been carried out to determine some properties. We showed that this SsBgl3 protein displayed both β-glucosidase and exoglucanase activities with optimal activity at 55 °C and at pH 5. The transglycosylation activity was investigated using gluco-oligosaccharides TLC analysis. The molecular modeling and comparison with different crystal structures of β-glucosidases showed that SsBgl3 putative protein present three domains. They correspond to an (α/β)8 domain TIM barrel, a five-stranded α/β sandwich domain (both of which are important for active-site organization), and a C-terminal fibronectin type III domain. Enzyme engineering will be soon investigated to identify the key residues for the catalytic reactions.

Keywords: Glycoside hydrolase; Modeling; Sclerotinia sclerotiorum; Transglycosylation; β-glucosidase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ascomycota / enzymology*
  • Chromatography, Gel
  • Computer Simulation
  • Electrophoresis, Polyacrylamide Gel
  • Fungal Proteins / chemistry*
  • Fungal Proteins / isolation & purification
  • Glycoside Hydrolases / chemistry*
  • Glycoside Hydrolases / isolation & purification
  • Hot Temperature
  • Hydrogen-Ion Concentration
  • Models, Molecular
  • Protein Conformation
  • Proteomics
  • Reproducibility of Results
  • Substrate Specificity
  • beta-Glucosidase / chemistry*
  • beta-Glucosidase / isolation & purification

Substances

  • Fungal Proteins
  • Glycoside Hydrolases
  • beta-Glucosidase