The complete chloroplast genome sequence of the medicinal plant Glehnia littoralis F.Schmidt ex Miq. (Apiaceae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3674-5. doi: 10.3109/19401736.2015.1079850. Epub 2015 Sep 14.

Abstract

Glehnia littoralis F. Schmidt ex Miq is an oriental medicinal herb belonging to Apiaceae family, and its dried roots and rhizomes are known to show various pharmacological effects. The complete chlorplast genome of G. littoralis was generated by de novo assembly using whole genome sequencing data. The chloroplast genome of G. littoralis was 147 467 bp in length and divided into four distinct regions: large single copy region (93 493 bp), small single copy region (17 546 bp) and a pair of inverted repeat regions (18 214 bp). A total of 114 genes including 80 protein-coding genes, 30 tRNA genes and 4 rRNA genes were predicted and accounted for 57.1% of the chloroplast genome. Phylogenetic analysis with the reported chloroplast genomes revealed that G. littoralis is an herbal species closely related to Ledebouriella seseloides, an herbal medicinal plant.

Keywords: Chloroplast; genome sequence, Glehnia littoralis; medicinal plant.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Apiaceae / genetics*
  • Chloroplast Proteins / genetics
  • Evolution, Molecular
  • Genes, Plant
  • Genome Size
  • Genome, Chloroplast*
  • Phylogeny
  • Plants, Medicinal / genetics
  • RNA, Ribosomal / genetics
  • RNA, Transfer / genetics
  • Whole Genome Sequencing

Substances

  • Chloroplast Proteins
  • RNA, Ribosomal
  • RNA, Transfer