Exploiting hydrophobicity for efficient production of transmembrane helices for structure determination by NMR spectroscopy

Anal Chem. 2015 Sep 15;87(18):9126-31. doi: 10.1021/acs.analchem.5b02365. Epub 2015 Sep 2.

Abstract

Despite the biological and pharmaceutical significance of membrane proteins, their tertiary structures constitute less than 3% of known structures. One of the major obstacles for initiating structural studies of membrane proteins by NMR spectroscopy is the generation of high amounts of isotope-labeled protein. In this work, we have exploited the hydrophobic nature of membrane proteins to develop a simple and efficient production scheme for isotope-labeled single-pass transmembrane domains (TMDs) with or without intrinsically disordered regions. We have evaluated the applicability and limitations of the strategy using seven membrane protein variants that differ in their overall hydrophobicity and length and show a recovery for suitable variants of >70%. The developed production scheme is cost-efficient and easy to implement and has the potential to facilitate an increase in the number of structures of single-pass TMDs, which are difficult to solve by other means.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Cell Membrane / chemistry*
  • Humans
  • Hydrophobic and Hydrophilic Interactions*
  • Magnetic Resonance Spectroscopy
  • Membrane Proteins / chemistry*
  • Micelles
  • Models, Molecular
  • Molecular Sequence Data
  • Phospholipid Ethers / chemistry
  • Protein Structure, Secondary

Substances

  • 1,2-dihexadecyl-sn-glycero-3-phosphocholine
  • Membrane Proteins
  • Micelles
  • Phospholipid Ethers