Engineering catechol 1, 2-dioxygenase by design for improving the performance of the cis, cis-muconic acid synthetic pathway in Escherichia coli

Sci Rep. 2015 Aug 26:5:13435. doi: 10.1038/srep13435.

Abstract

Regulating and ameliorating enzyme expression and activity greatly affects the performance of a given synthetic pathway. In this study, a new synthetic pathway for cis, cis-muconic acid (ccMA) production was reconstructed without exogenous induction by regulating the constitutive expression of the important enzyme catechol 1,2-dioxygenase (CatA). Next, new CatAs with significantly improved activities were developed to enhance ccMA production using structure-assisted protein design. Nine mutations were designed, simulated and constructed based on the analysis of the CatA crystal structure. These results showed that mutations at Gly72, Leu73 and/or Pro76 in CatA could improve enzyme activity, and the activity of the most effective mutant was 10-fold greater than that of the wild-type CatA from Acinetobacter sp. ADP1. The most productive synthetic pathway with a mutated CatA increased the titer of ccMA by more than 25%. Molecular dynamic simulation results showed that enlarging the entrance of the substrate-binding pocket in the mutants contributed to their increased enzyme activities and thus improved the performance of the synthetic pathway.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Catechol 1,2-Dioxygenase / genetics
  • Catechol 1,2-Dioxygenase / metabolism*
  • Escherichia coli / physiology*
  • Genetic Enhancement / methods*
  • Metabolic Engineering / methods
  • Protein Engineering / methods
  • Signal Transduction / physiology*
  • Sorbic Acid / analogs & derivatives*
  • Sorbic Acid / isolation & purification
  • Sorbic Acid / metabolism
  • Synthetic Biology / methods

Substances

  • muconic acid
  • Catechol 1,2-Dioxygenase
  • Sorbic Acid