Infection Efficiency of Four Phytophthora infestans Clonal Lineages and DNA-Based Quantification of Sporangia

PLoS One. 2015 Aug 24;10(8):e0136312. doi: 10.1371/journal.pone.0136312. eCollection 2015.

Abstract

The presence and abundance of pathogen inoculum is with host resistance and environmental conditions a key factor in epidemic development. Therefore, several spore-sampling devices have been proposed to monitor pathogen inoculum above fields. However, to make spore sampling more reliable as a management tool and to facilitate its adoption, information on infection efficiency and molecular tools for estimating airborne sporangia concentration are needed. Experiments were thus undertaken in a growth chamber to study the infection efficiency of four clonal lineages of P. infestans (US-8, US-11, US-23, and US-24) by measuring the airborne sporangia concentration and resulting disease intensity. The relationship between the airborne sporangia concentration and the number of lesions per leaf was exponential. For the same concentration, the sporangia of US-23 caused significantly more lesions than the sporangia of the other clonal lineages did. Under optimal conditions, an airborne sporangia concentration of 10 sporangia m-3 for US-23 was sufficient to cause one lesion per leaf, whereas for the other clonal lineages, it took 15 to 25 sporangia m-3 to reach the same disease intensity. However, in terms of diseased leaf area, there was no difference between clonal lineages US-8, US-23 and US-24. Also, a sensitive quantitative real-time polymerase chain reaction (qPCR) tool was developed to quantify P. infestans airborne sporangia with detection sensitivity of one sporangium. The specificity of the qPCR assay was rigorously tested for airborne inoculum and was either similar to, or an improvement on, other published PCR assays. This assay allows rapid and reliable detection and quantification of P. infestans airborne sporangia and thereby, facilitates the implementation of spores-sampling network.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Fungicides, Industrial / pharmacology
  • Phytophthora
  • Phytophthora infestans / genetics*
  • Phytophthora infestans / growth & development
  • Phytophthora infestans / pathogenicity
  • Plant Diseases / microbiology
  • Plant Diseases / prevention & control*
  • Plant Leaves / genetics*
  • Plant Leaves / growth & development
  • Plant Leaves / microbiology
  • Solanum tuberosum / drug effects
  • Solanum tuberosum / genetics
  • Solanum tuberosum / microbiology*
  • Sporangia / genetics
  • Sporangia / growth & development

Substances

  • Fungicides, Industrial

Grants and funding

This work was financially supported by Agriculture and Agri-Food Canada and Compagnie de recherche Phytodata inc. under a collaborative research agreement. The development of the primers with DNA from pure cultures was funded by the Canadian Safety & Security Program (project CRTI 04-0045RD). Compagnie de recherche Phytodata inc. provided support in the form of salaries for HVdH, MGR and JC. HVdH was involved in the decision to publish and preparation of the manuscript. Compagnie de recherche Phytodata inc. did not have any additional role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript. The specific roles of these authors are articulated in the ‘author contributions’ section.