Polymorphisms in DNA repair and multidrug resistance genes among Sindhis of Central India

Environ Toxicol Pharmacol. 2015 Sep;40(2):480-5. doi: 10.1016/j.etap.2015.07.019. Epub 2015 Jul 29.

Abstract

Polymorphisms in DNA repair and multidrug resistance genes might contribute to interindividual and interethnic differences in DNA repair capacity and drug disposition respectively. In the present study, we determined the allele and genotype frequencies of four single nucleotide polymorphisms (SNPs) located in the DNA repair genes, XRCC1, XRCC3, XPD, OGG1, namely XRCC1 Arg399Gln, XRCC3 Thr241Met, XPD Lys751Gln, and OGG1 Ser326Cys, respectively and two SNPs located in the multidrug resistance gene, ABCB1, namely ABCB1 C3435T and ABCB1 C1236T, in 33-35 healthy and unrelated Sindhi individuals, residing in the Vidarbha region of Central India and compared them with the Maharashtrian population from the same geographical region and some other HapMap populations from the HapMap database. The study findings reveal that the Indian Sindhis are closely related to the Maharashtrians as well as Utah residents with Northern and Western European ancestry and Gujarati Indians in Houston, Texas in the HapMap database.

Keywords: Cancer; DNA repair; Drug disposition; Indian Sindhis; Multidrug resistance; SNP.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • ATP Binding Cassette Transporter 1 / genetics*
  • Adult
  • DNA Glycosylases / genetics*
  • DNA Repair
  • DNA-Binding Proteins / genetics*
  • Gene Frequency
  • Genotype
  • Humans
  • India / ethnology
  • Male
  • Middle Aged
  • Phylogeny
  • Polymorphism, Single Nucleotide*
  • White People / ethnology*
  • White People / genetics
  • X-ray Repair Cross Complementing Protein 1
  • Xeroderma Pigmentosum Group D Protein / genetics*
  • Young Adult

Substances

  • ABCA1 protein, human
  • ATP Binding Cassette Transporter 1
  • DNA-Binding Proteins
  • X-ray Repair Cross Complementing Protein 1
  • X-ray repair cross complementing protein 3
  • XRCC1 protein, human
  • DNA Glycosylases
  • oxoguanine glycosylase 1, human
  • Xeroderma Pigmentosum Group D Protein
  • ERCC2 protein, human