Association of a single nucleotide polymorphism in the 5' upstream region of the porcine myosin heavy chain 4 gene with meat quality traits in pigs

Anim Sci J. 2016 Mar;87(3):330-5. doi: 10.1111/asj.12442. Epub 2015 Aug 13.

Abstract

We identified a potential molecular marker associated with meat quality traits in the myosin heavy chain 4, MYH4 gene of Landrace pigs. Sequencing revealed a single nucleotide polymorphism (SNP; g.-1398G>T) in the 5' upstream region of MYH4. It was significantly associated with the number of type IIa muscle fibers and water-holding capacity based on filter-paper fluid uptake. The GG genotype groups had a greater number of type IIa fibers and a larger area composed of type IIa fibers than the other genotype group (P = 0.004 and P = 0.061, respectively). Expression level of MYH4 gene in the genotype TT or GT was higher than in genotype of GG (P < 0.0001). The T allele may enhance expression level of MYH4 gene and then the portion of IIb type fiber in the muscle be increased by the T allelle. Therefore, we suggest that the g.-1398G>T in the 5' upstream region of the porcine MYH4 may be used as a molecular marker for meat quality traits, although its functional effect is not defined yet.

Keywords: meat quality; muscle fiber composition; myosin heavy chain 4 gene; pig; single nucleotide polymorphism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Animals
  • Body Water / metabolism
  • Food Quality*
  • Gene Expression
  • Genetic Association Studies / veterinary*
  • Genetic Markers
  • Genotype
  • Meat*
  • Muscle Fibers, Skeletal / classification
  • Muscle Fibers, Skeletal / metabolism
  • Myosin Heavy Chains / genetics*
  • Myosin Heavy Chains / metabolism
  • Polymorphism, Single Nucleotide / genetics*
  • Swine / genetics*
  • Swine / metabolism*

Substances

  • Genetic Markers
  • Myosin Heavy Chains